CREATE TABLE bug12429573 (i INTEGER PRIMARY KEY, j INTEGER, KEY(j)) ENGINE=INNODB STATS_PERSISTENT=1; ANALYZE TABLE bug12429573; Table Op Msg_type Msg_text test.bug12429573 analyze status OK SELECT last_update FROM mysql.innodb_index_stats WHERE table_name = 'bug12429573' AND last_update NOT IN (SELECT last_update FROM mysql.innodb_table_stats WHERE table_name = 'bug12429573'); last_update ANALYZE TABLE bug12429573; Table Op Msg_type Msg_text test.bug12429573 analyze status OK SELECT last_update FROM mysql.innodb_index_stats WHERE table_name = 'bug12429573' AND last_update NOT IN (SELECT last_update FROM mysql.innodb_table_stats WHERE table_name = 'bug12429573'); last_update DROP TABLE bug12429573;